results

Defines the creation of result data structures.

source

plot_roi_boundaries

 plot_roi_boundaries (roi:Union[neuralactivitycubic.input.ROI,neuralactivi
                      tycubic.analysis.AnalysisROI], line_color:str,
                      line_style:str, line_width:Union[int,float])

source

plot_window_size_preview

 plot_window_size_preview (preview_image:numpy.ndarray,
                           grid_configs:Dict[str,Any], focus_area_roi:Opti
                           onal[neuralactivitycubic.input.ROI]=None)

source

plot_activity_overview

 plot_activity_overview (analysis_rois_with_sufficient_activity:Union[List
                         [neuralactivitycubic.analysis.AnalysisROI],List],
                         preview_image:numpy.ndarray,
                         indicate_activity:bool=False, focus_area:Optional
                         [neuralactivitycubic.input.ROI]=None,
                         grid_configs:Optional[Dict[str,Any]]=None)
Type Default Details
analysis_rois_with_sufficient_activity Union With python 3.11 - change back to: List[Never]
preview_image ndarray
indicate_activity bool False
focus_area Optional None
grid_configs Optional None
Returns Tuple

source

plot_rois_with_label_id_overview

 plot_rois_with_label_id_overview (analysis_rois_with_sufficient_activity:
                                   Union[List[neuralactivitycubic.analysis
                                   .AnalysisROI],List],
                                   preview_image:numpy.ndarray, focus_area
                                   :Optional[neuralactivitycubic.input.ROI
                                   ]=None, grid_configs:Optional[Dict[str,
                                   Any]]=None)
Type Default Details
analysis_rois_with_sufficient_activity Union With python 3.11 - change back to: List[Never]
preview_image ndarray
focus_area Optional None
grid_configs Optional None
Returns Tuple

source

plot_intensity_trace_with_identified_peaks_for_individual_roi

 plot_intensity_trace_with_identified_peaks_for_individual_roi
                                                                (analysis_
                                                                roi:neural
                                                                activitycu
                                                                bic.analys
                                                                is.Analysi
                                                                sROI)

source

export_peak_results_df_from_analysis_roi

 export_peak_results_df_from_analysis_roi
                                           (analysis_roi:neuralactivitycub
                                           ic.analysis.AnalysisROI)

source

create_single_roi_amplitude_and_delta_f_over_f_results

 create_single_roi_amplitude_and_delta_f_over_f_results
                                                         (df_all_results_s
                                                         ingle_roi:pandas.
                                                         core.frame.DataFr
                                                         ame,
                                                         zfill_factor:int)

source

create_single_roi_auc_results

 create_single_roi_auc_results
                                (df_all_results_single_roi:pandas.core.fra
                                me.DataFrame, zfill_factor:int)